Releases Notes
Version.3.4.0 (Current)
Custom contrasts ES
crosstab fixed again
fancy stopping mechanisms
better messages and warning
better formulas in R
weights in R
weights for glm
better weights for weird logistic models
Readiness for input gzlm
fix crosstab in logistic
Model comparison for strange logistics model works
weights for gzlm
Info about covariates scaling
Version.3.3.8
- Fix simple effects emmeans bug
Version.3.3.6
- Fix issues with R.utils S3 methods
Version.3.3.4
Better omnibus tests for ordinal models
better updates of tables
exclude some models for JN plot
r syntax for contrasts
Fix emmeans table for mixed multinomial
JN for any combination of moderators levels
JN plot for dichotomous IV
Nicer johnson-neyman plot
Proper warnings in R
Better optimization for lmer models
Custom link and distributions for generalized mixed models
JN plot expb for gzlm models
Version.3.3.3
- better plots for bigdata
Version.3.3.2
reduce Imports moving to Suggests
Better effect size C.I. for glm
Custom contrasts tables
Pretty clean
custom contrasts tables
custom contrasts in R interface
fixing emmeans tables for multinomial mixed
fix dependent variable in gzlm
Johnson-Neyman plot for all models
Custom contrasts for all models
custom contrasts for GLM
Custom contrast focused analysis
Implementation of custom contrasts
vignettes
Version.3.3.1
marginal effects for newer version of R
readme
ARMA residual variance
ARMA residual structure in mixed
better update for plots
Version.3.2.9
fix annoying messages in R
fix export for assumptions plots
Version.3.2.8
fix plots export for all models
fix for exporting plots
fix strange random effect plots
Fix multinomial labels
Version.3.2.7
cbind interface for probit
fix bug in interface
cbind data for logistic
Version.3.2.5
Johnson-Neyman plot for general linear model
fit to 2.5 (part 1)
cross classification tab for logistic
Zeroing negative adjusted r-squares for lm
js update for different interfaces
Code restructuring
Range conditioning for GLM
simple effects for range
collinerity stats
Better labels for exp(B)
Version.3.2.3
- fix assumptions plots
Version.3.2.2
- no parallel for windows
Version.3.2.1
memory issue in plots
versioning
Version.3.2.0
log in windows
small updates
qqplots
logs
a
memory issues in plots
Version.3.1.6
- more robust model comparisons
Version.3.1.5
- residual variance-covariance structures in R
Version.3.1.4
- ordinal posthoc
Version.3.1.2
More options for R interface
fix R2 adj
better plots lines
Version.3.1.1
- more on syntax
Version.3.1.0
Readme
better feedback when custom gzlm fails
Fix custom distribution updating
Fix F-test model comparison in GLM
R nested formulas
Version.3.0.9
Better handling of zeros
Fix multinomial mixed
fix some table update
Version.3.0.8
nesting and crossing by formula in linear mixed model
Better optimizer for glmer
Identify by row number extreme cases in assumptions check plots
Version.3.0.7
more info for residuals covariance matrix
Assumptions plots for autocorrelated mixed models
fixing blocks of random effects in GZ mixed
Fix the random blocks
Improve the models comparison table
Fix predicted with missing
Version.3.0.4
Precision information in beta models
beta regression
it works
autoregressive and unstructured residual variances and covariances
better dispatch
fixing some plot aesthetics
More solid nested formulas
Version 3
Support for parallel computations of bootstrap stats
Work on bootstrap
Adjusted R2 for gzlm
Model comparison for clm
Fix posthoc for clm
Marginal effects for ordinal models
Parallel test for proportional odds models
Different heteroschedasticity-consistent standard error methods for the general linear model
Efficient bootstrap confidence intervals
New names for commands in R interface
Pretty good R interface
Plots for all generalized mixed models
Removable notes for tables
Robust F-tests for lm models
Models comparison for multinomila mixed models
Multinomial mixed model
Options for methods for plotting random effects
Better random effects plot
Unlimited levels in plots
Offset variable for generalized linear models
Relative risk and marginal effects for GzL Mixed
Better options for syntax mode
Improvements in the R syntax
Proportional odds ordinal regression
Multinomial marginal effects
Marginal effects
Models comparison
vcov glm
Major options names change (this will break back compatibility for good)
Variance partitioning coefficients in mixed models
Ordinal regression in GzLM
New plots for assumptions in mixed
Version.3.0.2
Precision information in beta models
beta regression
it works
autoregressive and unstructured residual variances and covariances
better dispatch
fixing some plot aesthetics
More solid nested formulas
Version 3
Support for parallel computations of bootstrap stats
Work on bootstrap
Adjusted R2 for gzlm
Model comparison for clm
Fix posthoc for clm
Marginal effects for ordinal models
Parallel test for proportional odds models
Different heteroschedasticity-consistent standard error methods for the general linear model
Efficient bootstrap confidence intervals
New names for commands in R interface
Pretty good R interface
Plots for all generalized mixed models
Removable notes for tables
Robust F-tests for lm models
Models comparison for multinomila mixed models
Multinomial mixed model
Options for methods for plotting random effects
Better random effects plot
Unlimited levels in plots
Offset variable for generalized linear models
Relative risk and marginal effects for GzL Mixed
Better options for syntax mode
Improvements in the R syntax
Proportional odds ordinal regression
Multinomial marginal effects
Marginal effects
Models comparison
vcov glm
Major options names change (this will break back compatibility for good)
Variance partitioning coefficients in mixed models
Ordinal regression in GzLM
New plots for assumptions in mixed
Version.2.9.3
Major options names change (this will break back compatibility for good)
Variance partitioning coefficients in mixed models
Ordinal regression in GzLM
New plots for assumptions in mixed
Version.2.6.6
- Multinomial labels in simple effects
Version.2.6.5
- Fix relative risk table
Version.2.6.4
Random effects in plots (again)
Percentiles labels
Fix post-hoc tests columns
Version.2.6.3
Smooth random effects plot lines
Improved random effects listing for GzLMM
Allow strange names in mixed plots
Random effects listing prevents combinatoric explotion
Version.2.6.2
Fix dots in effect sizes table
Update effect sizes
Fix multinomial posthoc labels
Version.2.6.1
Better effect size indices for simple effects in GLM
Total df in GLM
Version.2.6.0
- Better effect size indices in GLM
Version.2.5.4
- Fix issue with effect size in 2.5.3
Version.2.5.3
- Cluster-based centering (second issue)
Version.2.5.2
Fix cluster-based centering for strange combinations of cluster variables
Fix clusterbased centering in glmmixed
Version.2.5.0
Fix simple effects for multinomial models
Fix cluster centering for integer coded clusters
GLM tot SS
Centered covariated for GLM
Fix for bootstrap CI for random effect
Fix random coefs CI when covariance are present
Update some tests
Fix confidence intervals labels
Version.2.4.8
- Fix SS total for GLM
Version.2.4.7
Correct dodging of plots
Fix transfer random effect UI
Spelling errors in Gmixed
Version.2.4.5
Confidence intervals for generalized mixed models
Confidence intervals for random effects in mixed models
Better labels in Gmixed info table
BIC in GzLM
Save residuals and predicted for Gz mixed
Save predicted and residuals for GzLM
Save predicted and residuals for mixed models
Code restructcuring
Tidy format code
Fix order of levels in posthoc tests
jamovi version compliance
Fix jamovi miniapp
Version.2.4.4
Better labels in Gmixed info table
BIC in GzLM
Save residuals and predicted for Gz mixed
Save predicted and residuals for GzLM
Save predicted and residuals for mixed models
Code restructcuring
Tidy format code
Fix order of levels in posthoc tests
Version.2.4.0
plot() function in R
Suppress annoying warnings
add plot to the R interface
Fix gamlj_simpleEffects() output
Improved R interface
Better options structure in R for all models
Fix posthoc documentation
Better options structure when passed by R, for contrasts and scling in GLM
Better effect size indexes for GLM
Change scale of the dependent variable in GLM and Mixed
Dependent variable transformation for GLM and Mixed
fix direction description in Generalized models
Choose DF method in mixed models
Better ICC
Fix ICC for Generalized mixed
Fix labels in random coefficients histogram
Add posthoc and simpleEffects convenience function for R
Version.2.3.0
Better warnings for Generalized Linear Models
Warning for not integer variable in Poisson models
Fixed post-hoc interaction emmeans issue
Assumptions checking plots for GLM and Mixed Models
Version.2.2.1
Greek letters in windows
Effect size details for GLM
Fix logLik in Mixed Models
LogLik comment in Generalized Mixed Models
Version.2.2.0
Fix resources limit bug
Info (effect sizes and F test) for intercept in the General Linear Model
Version.2.1.2
Adjustments to the new version of lme4
Add data for Negative Binomial Mixed Model examples
ICC for Generalized Mixed Models
Overdispersion indicator for Generalized Linear Models
Overdispersion indicator for Generalized Mixed Models
Fix methods for C.I. in Generalized Mixed Models
Fix plot for NB Mixed models
First implementation of Mixed Negative Binomial models
Version.2.1.1
Fix LRT for random effects
Update R help
fix order of interactions in Gzlm
Fix order of interactions in GLM R interface
Version.2.1.0
Fix multinomial estimates bug
response type for predicted in R interface
Fix plots in R
Version.2.0.5
Fix small bugs related with standardizing within clusters in mixed models
Fix plots in mixed with multiple clustering variables
Version.2.0.4
fix update in R interface
update tests for R interface
Center covariates by default in R interface
Extract predicted values in R interface for all models
Different optimizers in GzMixed
Improved handling of aliased models
GLM and GzLM handle cases where parameters are not estimates
Version.2.0.3
Improved warnings and errors for GzMixed
Improved warnings and errors form GzLM
Fix confidence intervals feeback for singular models
Fix results for singular rank models
Mixed: add info about optimizer
Mixed: Improved convergence with different optimizers
Fix jmvcore calls
Version 2.0.2
Version.2.0.1
Fix random effects plot in gzmlmixed
Fix simple effects in R 3.6
Fix locate issue in linux
optimizer = “bobyqa” for generalized mixed models
Version.2.0.0
fix Random Effects plot of linear predictor
Color observed scores in plots when moderator is categorical
BIC in mixed models
Allow F and t test in simple effects for large sample in Mixed models
Different methods for CI in the generalized mixed models
AIC, BIC and Deviance for Generalized Mixed Models
Generalized mixed models
Version.1.6.0
New dataset for Poisson model testing
new tests for R package
Proper labels for estimated marginal means in GzLM
Fix effect size indexes defaults for custom model
Custom distribution and link function in the GzLM
Fix Relative Risk CI inversion
Version.1.5.4
- fix gzlm UI bug
Version.1.5.3
Update info table when intercept is changed
Fix bug in updating confidence interval length
Relative Risk for logistic regression
add singular fit check in mixed models
fix the AIC in info table
EXp(B) confidence intervals
First versions
version 1.0.5
- polynomial effects
- Update graphs when model terms are changed
- Fix the R-squared for not binomial GZLM
- added datasets
version 1.0.4
- Fix bug in simple effects display in Windows 10
- Fix simple effects for “dummy” coded factors
version 1.0.3
- add R interface command to obtain a ggplot object
- fix some characters in Windows
version 1.0.1
Common
- bug fix regarding recycling results with very large datasets
- Estimated marginal means for conditioned covariates
- contrasts labels in the simple effects parameters table
- contrasts labels in the plots
- custom levels for conditioning of continuous variables involved in interactions
- labels or values in simple effects tables and plots for continuous covariates
- fix interaction disappearing from model declaration
- fix variables name with spaces and weired characters
- Improved description of contrast coding
- add dummy coding (0 and 1) with intercept equal to reference group
- Fix interaction symbol in windows 10
- Restructuring of simple effects and posthoc table for better reading
- Improved compatibility with R when loaded as R package
- Helper functions to interact with the results in R
- Recycle of table results to speed up results updating
- Fix for factor levels labels with spaces and other weired characters
- Fix for variable names with spaces and other weired characters
- Improved plots
Mixed models
- Intra-class correlation for random intercepts
- Random effects plots
- LRT for random effects
- Fix for models without fixed intercept
- Fix for random intercept only models
- Wider range of estimation techniques when model does not converge at first run
- Improved warnings and comments
- More flexible estimation of simple effects
GLM models
- Added Kolmogorov-Smirnov and Shapiro-Wilk tests for normality of residuals
- Added Adjusted R-squared
GLZM models
- Several small bug fixes
- Improved info table regarding model implementation
version 0.9.7
- fix cluster-based centering and standardizing
version 0.9.6
- Fix multinomial plot axes
version 0.9.4
New features
- Probit model
- Over-dispersed Poisson model
- Negative binomial model
Bug fixes
- Plot without confidence intervals
- Contrasts coding in line wiht ANOVA module
version 0.9.3
Plotting raw data along with predicted effects
Y-axis range can be set to the range of the dependent variable
Confidence intervals for all models in the plots
Catching several errors with degenerated or non-estimable multinomial models
version 0.9.2
Fixed a bug in the GZLM R-squared. Now the R-squared corresponds to McFadden’s R squared ref info
Fix errors with non-standard names of variables
Better warnings when emmeans fails to estimate the post-hocs in GZLM
Labels in multinomial plots for separate lines variable
Uncorrelated random effects option now works
version 0.0.9
- First release to go public